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des [Tue Dec 13 2016 11:16:33 GMT+0100 (CET)]
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des [Tue Dec 13 2016 11:16:33 GMT+0100 (CET)]

phospholipid desaturase
locus
BSU19180
pI
9.00
mw
40.00 kDa
function
adaptation of membrane fluidity at low temperatures
product
phospholipid desaturase
essential
no
synonyms
yocE

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.4|Lipid metabolism] → [category|SW 2.4.3|Lipid metabolism/ other]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.5|Cold stress proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|lipid metabolism/ other], [SW|cold stress proteins], [SW|membrane proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|DesR regulon], [SW|YfiK regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    2,089,396 -> 2,090,454

    Phenotypes of a mutant

  • cold-sensitive [Pubmed|19820084]
  • The protein

    Catalyzed reaction/ biological activity

  • introduces double bonds into long chain fatty acids [Pubmed|21665975]
  • [SW|Cofactors]

  • [protein|search|Des] receives electrons from ferredoxin ([protein|search|Fer]) or from either of the two flavodoxins, [protein|search|YkuN] or [protein|search|YkuP], the three proteins can functionally replace each other [Pubmed|21665975]
  • [SW|Localization]

  • integral membrane protein [Pubmed|21665975]
  • [SW|Interactions]

  • [protein|search|Des]-[protein|search|Fer] (electron transfer to [protein|search|Des]) [Pubmed|21665975]
  • [protein|search|Des]-[protein|search|YkuN] (electron transfer to [protein|search|Des]) [Pubmed|21665975]
  • [protein|search|Des]-[protein|search|YkuP] (electron transfer to [protein|search|Des]) [Pubmed|21665975]
  • Expression and Regulation

    Operon

  • ''des'' [Pubmed|10559169]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|10559169]
  • Regulation

  • induced upon cold shock ([protein|search|DesR]) [Pubmed|11285232]
  • repressed at increased membrane fluidity [Pubmed|12207704]
  • Regulatory mechanism

  • [protein|search|DesR]: transcription activation [Pubmed|11285232], [Pubmed|19820084]
  • [SW|YfiK]: transcription repression [Pubmed|26647299]
  • Additional information

  • in strains evolved for growth at low pressure, 'des' expression is significantly increased as compared to the wild type [PubMed|22416764]
  • Biological materials

    Mutant

  • 1A835 ( ''des''::''kan''), [Pubmed|11285232], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A835&Search=1A835 BGSC]
  • Labs working on this gene/protein

  • [SW|Diego de Mendoza], Universidad Nacional de Rosario, Argentine [http://www.ibr.gov.ar/eng/investigacion/demendoza.htm homepage]
  • References

    Reviews

  • 19363032
  • Original publications

  • 19164152,11251847,12399512,9555904,10559169,11285232,12207704,12730185,19820084,12207704,20581210,22416764,18154726,21665975,26647299