SubtiBank SubtiBank
yojF [Tue Dec 13 2016 11:16:34 GMT+0100 (CET)]
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yojF [Tue Dec 13 2016 11:16:34 GMT+0100 (CET)]

unknown
locus
BSU19470
pI
7.00
mw
12.00 kDa
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • [SW|Categories] containing this gene/protein

  • [SW|proteins of unknown function]

    • This gene is a member of the following [SW|regulons]

  • [SW|Spx regulon]

    • Gene

    Coordinates on the chromosome (coding sequence)
    2,122,325 -> 2,122,675

    The protein

    Structure

  • [PDB|1NJH]

    • Expression and Regulation

    Operon

  • ''[protein|search|yojE]-[protein|search|yoyC]-[protein|search|yojF]-[SW|bshB2]'' (minor transcript) [Pubmed|23894131]
  • ''[protein|search|yoyC]-[protein|search|yojF]-[SW|bshB2]'' (major transcript) [Pubmed|23894131,20308541]

    • [SW|Sigma factor]

  • ''[protein|search|yojE]'': [protein|search|SigA] [Pubmed|23894131]
  • ''[protein|search|yoyC]'': [protein|search|SigA] [Pubmed|23894131]

    • Regulation

  • ''[protein|search|yoyC]'': induced by diamide stess (thiol depletion) ([protein|search|Spx]) [Pubmed|23894131]

    • Regulatory mechanism

  • [protein|search|Spx]: transcription activation [Pubmed|23894131]

    • Biological materials

    Mutant

  • CS211 (''[protein|search|yojF]''::''aphA3'', available in [SW|Colin Harwood]'s and [SW|Jörg Stülke]'s labs) [Pubmed|27197833]

    • References

    Operon and expression

  • 20308541,23894131,27197833