SubtiBank SubtiBank
yfkA [2019-01-30 12:33:17]
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yfkA [2019-01-30 12:33:17]

putative Fe-S oxidoreductase, affects the level of [protein|3054CD45713BBD69C2A528DE24AF6AF37175FD9D|Efp] modification
locus
BSU07955
pI
5.92
mw
43.00 kDa
protein length
373 aa Sequence Blast
gene length
1122 bp Sequence Blast
function
control of [protein|3054CD45713BBD69C2A528DE24AF6AF37175FD9D|Efp] modification
product
putative Fe-S oxidoreductase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.14|Translation factor modification and maturation]
  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.4|Protein modification] → [category|SW 3.3.4.8|Protein modification/ other]
  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    868,007 869,128

    Phenotypes of a mutant

  • inactivation suppresses the swarming defect of a [gene|248F0805272FED9B38ECBB31E2872BC9EC163CE0|ymfI] mutant [pubmed|29615499]

    • The protein

    [SW|Cofactors]

  • Fe-S cluster [pubmed|29292548]

    • Expression and Regulation

    Operons

    genes
    [gene|62718BBECEB18244B5CC877509679F5F9A0C50CD|yfkA]-[gene|5ACE71EBBDCEB0C534A91DE303FD8069BEFDD6A1|yfkC]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C348 (yfkA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2346 NBRP B. subtilis, Japan]
  • BKE07955 ([gene|62718BBECEB18244B5CC877509679F5F9A0C50CD|yfkA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07955 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGACTATCTAACTCCTTT, downstream forward: _UP4_TAGATGCGGATGAAAGAAAC
  • BKK07955 ([gene|62718BBECEB18244B5CC877509679F5F9A0C50CD|yfkA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07955 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGACTATCTAACTCCTTT, downstream forward: _UP4_TAGATGCGGATGAAAGAAAC

    • References

  • 22383849,29615499