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yteJ [2020-10-09 15:12:48]
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yteJ [2020-10-09 15:12:48]

stress protein
locus
BSU_29520
pI
9.00
mw
18.98 kDa
protein length
164 aa Sequence Blast
gene length
495 bp Sequence Blast
function
unknown
product
stress protein
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.13|Resistance against toxins/ antibiotics]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,019,533 3,020,027

    The protein

    [SW|Domains]

  • RDD domain (aa 26-158) (according to UniProt)

    • [SW|Localization]

  • cell membrane (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|ACB7F015027A83C5D3457818A71B6F47192CEFBE|sppA]-[gene|618337D9BCD1586C5874746D1001DA3A2724E57C|sppI]
    description
    [Pubmed|9987136]

    sigma factors

  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|9987136,12207695], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]

    • regulation

  • induced in response to cell wall stress ([protein|search|SigW]) [Pubmed|12207695]

    • additional information

  • self-processes its own C-termini [PubMed|24228759]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A110 (yteJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/110 NBRP B. subtilis, Japan]
  • BKE29520 ([gene|618337D9BCD1586C5874746D1001DA3A2724E57C|sppI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTCGCGTCCATTATTGTTC, downstream forward: _UP4_TAACCGATAACCCGGACTTC
  • BKK29520 ([gene|618337D9BCD1586C5874746D1001DA3A2724E57C|sppI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTCGCGTCCATTATTGTTC, downstream forward: _UP4_TAACCGATAACCCGGACTTC

    • References

  • 9987136,12207695,31424929