SubtiBank SubtiBank
tagC [2019-02-27 17:51:21]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

tagC [2019-02-27 17:51:21]

possibly involved in polyglycerol phosphate teichoic acid biosynthesis
locus
BSU35770
pI
7.34
mw
50.66 kDa
protein length
442 aa Sequence Blast
gene length
1329 bp Sequence Blast
function
biosynthesis of teichoic acid
product
unknown
essential
no
synonyms
dinC
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.1|Cell wall synthesis] → [category|SW 1.1.1.4|Biosynthesis of teichoic acid]
  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.1|Biosynthesis of cell wall components] → [category|SW 2.6.1.3|Biosynthesis of teichoic acid]

    • Gene

    Coordinates
    3,683,438 3,684,766

    The protein

    Structure

  • [PDB|5EFV] (from Staphylococcus aureus phage, corresponds to aa 14 ... 286, 32% identity)

    • [SW|Localization]

  • cytoplasm (homogenous) [Pubmed|16479537]

    • Expression and Regulation

    Operons

    genes
    [gene|60344F56DEB167FA62C16E52E8238393CEE19312|tagC]
    description
    [Pubmed|7934877]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [PubMed|8226626,8969214], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • induced upon DNA damage ([protein|search|LexA]) [http://www.ncbi.nlm.nih.gov/sites/entrez/8226626,8969214 PubMed]
    • view in new tab

    Biological materials

    Mutant

  • BKE35770 ([gene|60344F56DEB167FA62C16E52E8238393CEE19312|tagC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAATTTACCACCTCTAT, downstream forward: _UP4_TGATAATCAAATAGGCTGTA
  • BKK35770 ([gene|60344F56DEB167FA62C16E52E8238393CEE19312|tagC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAATTTACCACCTCTAT, downstream forward: _UP4_TGATAATCAAATAGGCTGTA

    • References

  • 8226626,8969214,9555905,7934877,16267290,16479537