ywcJ

similar to nitrate channel

Locus: BSU_38060

Isoelectric point: 7.68

Molecular weight: 28.31 kDa

Protein length: 256 aa

Gene length: 771 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ipa-48r

Genomic Context

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Categories containing this gene/protein

• Cellular processes → Transporters → Transporters/ other → Uptake of other small ions
• Metabolism → Electron transport and ATP synthesis → Respiration → Anaerobic respiration
• Groups of genes → Membrane proteins

Gene

Coordinates: 3,905,333 3,906,103

The protein

Protein family

• FNT transporter (TC 2.A.44) family (with YrhG, according to UniProt)

Paralogous protein(s)

• YrhG

Structure

• 3TDP (from Clostridium difficile, 36% identity) PubMed

Localization

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• Genes: ywcJ
  Description: PubMed

  Regulatory mechanism

  • Rex: repression, PubMed, in Rex regulon

Biological materials

Mutant

• MGNA-B672 (ywcJ::erm), available at the NBRP B. subtilis, Japan
• BKE38060 (ywcJ::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTGTCTTTTCCTGCTTTC, downstream forward: _UP4_TAAAAAAACTTCCAGAGATC
• BKK38060 (ywcJ::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTGTCTTTTCCTGCTTTC, downstream forward: _UP4_TAAAAAAACTTCCAGAGATC

References

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