ymzB

general stress protein, survival of ethanol and salt stresses

locus: BSU_17240

pI: 4.44

mw: 13.25 kDa

protein length: 118 aa

gene length: 357 bp

function: survival of ethanol and salt stresses

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]

Gene

Coordinates: 1,860,014 1,860,370

Expression and Regulation

Operons

• genes: [gene|3F53025AC42791F3378EAE5E7A0D6DC86C2765CF|ymaE]-[gene|5E811311BB4B5F637B768E526CE77FC91EE71C3E|ymzB]
  description: [Pubmed|20817675]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

  regulation

  • induced by stress ([protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]) [Pubmed|15805528]

• genes: [gene|5E811311BB4B5F637B768E526CE77FC91EE71C3E|ymzB]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B108 (ymzB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1107 NBRP B. subtilis, Japan]
• BKE17240 ([gene|5E811311BB4B5F637B768E526CE77FC91EE71C3E|ymzB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAATATTCCTCCTTTTG, downstream forward: _UP4_TGACAGCCACTTTCATCAAA
• BKK17240 ([gene|5E811311BB4B5F637B768E526CE77FC91EE71C3E|ymzB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAATATTCCTCCTTTTG, downstream forward: _UP4_TGACAGCCACTTTCATCAAA

References

• 15805528,20817675