SubtiBank SubtiBank
ypsA [2020-07-24 09:39:38]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ypsA [2020-07-24 09:39:38]

unknown
locus
BSU_22190
pI
4.47
mw
20.91 kDa
protein length
209 aa Sequence Blast
gene length
630 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,332,153 2,332,782

    Phenotypes of a mutant

  • increased susceptibility to hydrogen peroxide treatment [pubmed|31024470]
  • overexpression of YpsA interferes with [protein|41872E2EF00C79918DD077F2EF78F37E24FEB110|FtsZ] assembly [pubmed|31024470]

    • The protein

    Protein family

  • SLOG superfamily of nucleotide and ligand-binding proteins [pubmed|31024470]
  • UPF0398 family (single member, according to UniProt)

    • Structure

  • [PDB|2NX2]

    • [SW|Localization]

  • cytoplasm (according to Swiss-Prot)

    • Biological materials

    Mutant

  • MGNA-A417 (ypsA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/417 NBRP B. subtilis, Japan]
  • BKE22190 ([gene|5E5894ABD87B095191B109CEA9CEA89A5CA8A82D|ypsA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATTTCACCTGCTTTAA, downstream forward: _UP4_TAACAATGAGAGAGAAATTT
  • BKK22190 ([gene|5E5894ABD87B095191B109CEA9CEA89A5CA8A82D|ypsA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATTTCACCTGCTTTAA, downstream forward: _UP4_TAACAATGAGAGAGAAATTT

    • References

    Research papers

  • 31024470