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fabF [Mon Aug 31 2015 13:53:37 GMT+0200 (CEST)]
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fabF [Mon Aug 31 2015 13:53:37 GMT+0200 (CEST)]

beta-ketoacyl-acyl carrier protein synthase II, involved in the control of membrane fluidity
locus
BSU11340
pI
4.77
mw
43.00 kDa
function
fatty acid biosynthesis
product
beta-ketoacyl-acyl carrier protein synthase II
essential
yes
ec
2.3.1.179
synonyms
yjaY

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.7|Membrane dynamics]
  • [category|SW 2|Metabolism] → [category|SW 2.4|Lipid metabolism] → [category|SW 2.4.2|Biosynthesis of lipids] → [category|SW 2.4.2.1|Biosynthesis of fatty acids]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • [category|SW 6|Groups of genes] → [category|SW 6.1|Essential genes]
  • syns
    yjaY

    [SW|Categories] containing this gene/protein

  • [SW|membrane dynamics], [SW|biosynthesis of lipids], [SW|cell envelope stress proteins (controlled by SigM, V, W, X, Y)], [SW|essential genes]
  • This gene is a member of the following [SW|regulons]

  • [SW|FapR regulon], [SW|SigW regulon]
  • Gene

    Phenotypes of a mutant

  • essential [Pubmed|12682299]
  • The protein

    Catalyzed reaction/ biological activity

  • (Z)-hexadec-11-enoyl-[acyl-carrier-protein] + malonyl-[acyl-carrier-protein] = (Z)-3-oxooctadec-13-enoyl-[acyl-carrier-protein] + CO2 + [acyl-carrier-protein] (according to Swiss-Prot)
  • [protein|search|SigW]-dependent expression of ''[protein|search|fabF]'' and the ''[protein|search|yuaF]-[protein|search|floT]-[protein|search|yuaI]'' operon result in reduced membrane fluidity [Pubmed|21542858,22178969]
  • Protein family

  • beta-ketoacyl-ACP synthases family (according to Swiss-Prot)
  • Structure

  • [PDB|4LS5] [Pubmed|24641521]
  • Expression and Regulation

    Operon

  • ''[SW|fabHA]-[protein|search|fabF]'' [Pubmed|12737802]
  • [SW|Sigma factor]

  • ''[SW|fabHA]'': [protein|search|SigA] [Pubmed|12737802]
  • ''[protein|search|fabF]'': [protein|search|SigW] [Pubmed|21542858]
  • Regulation

  • ''[SW|fabHA]'': expressed when the cells experience a lack of malonyl-CoA ([protein|search|FapR]) [Pubmed|12737802]
  • ''[SW|fabHA]'': induced upon fatty acid biosynthesis inhibition [Pubmed|21383089]
  • ''[protein|search|fabF]'': induced by alkaline shock and by polymyxin B, vancomycin, cephalosporin C, D-cycloserine, and triton X-100 ([protein|search|SigW]) [Pubmed|21542858]
  • Regulatory mechanism

  • [protein|search|FapR]: transcription repression [Pubmed|12737802]
  • References

    Reviews

  • 15952903,17919287
  • Original Publications

  • 18384517,12837788,12737802,12682299,21383089,24641521,21542858,22178969