yisR

similar to transcription factor ([SW|AraC family])

locus: BSU_10830

pI: 7.38

mw: 33.05 kDa

protein length: 287 aa

gene length: 864 bp

function: unknown

product: unknown

essential: no

synonyms: yuxC,yucF

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 1,162,267 1,163,130

The protein

Protein family

• [SW|AraC family]

[SW|Domains]

• [SW|HTH araC/xylS-type domain] (aa 183-281) (according to UniProt)

Structure

• [PDB|2K9S] (E. coli AraC, corresponds to aa 184 ... 279, 30% identity) [pubmed|19422057]

Expression and Regulation

Operons

• genes: [gene|5B173B400D0B4C150E94A98D35E27B0B4358489B|yisR]-[gene|17F5188958A415D8D09439E02E1D1E0661B5C760|iolQ]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-B212 (yisR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1211 NBRP B. subtilis, Japan]
• BKE10830 ([gene|5B173B400D0B4C150E94A98D35E27B0B4358489B|yisR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10830 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGAATCATCCTCCTTT, downstream forward: _UP4_CAATAACCAGACGAGGGATG
• BKK10830 ([gene|5B173B400D0B4C150E94A98D35E27B0B4358489B|yisR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10830 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGAATCATCCTCCTTT, downstream forward: _UP4_CAATAACCAGACGAGGGATG

References

• 23504016,19422057