yydK

similar to transcriptional regulator ([SW|GntR family])

locus: BSU_40130

pI: 5.19

mw: 27.13 kDa

protein length: 236 aa

gene length: 711 bp

function: unknown

product: transcriptional regulator ([SW|GntR family])

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 4,123,193 4,123,903

The protein

Protein family

• [SW|GntR family] of transcription factors

[SW|Domains]

• [SW|HTH gntR-type domain] (aa 1-69) (according to UniProt)

Structure

• [PDB|3BWG]

Expression and Regulation

Operons

• genes: [gene|59EBB1812BA939110BC00ACE30057AB987E61B30|yydK]-[gene|D29C8EF4F415C68A90DF693AB1AC12537CE87298|yyzN]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B806 (yydK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1805 NBRP B. subtilis, Japan]
• BKE40130 ([gene|59EBB1812BA939110BC00ACE30057AB987E61B30|yydK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40130 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACGCATTCCTCATTTAT, downstream forward: _UP4_TAGGGCTCTTCACTACGGTA
• BKK40130 ([gene|59EBB1812BA939110BC00ACE30057AB987E61B30|yydK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40130 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACGCATTCCTCATTTAT, downstream forward: _UP4_TAGGGCTCTTCACTACGGTA

References

• 23504016