SubtiBank SubtiBank
ylaK [2019-08-16 10:27:17]
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ylaK [2019-08-16 10:27:17]

similar to phosphate starvation inducible protein PhoH
locus
BSU_14810
pI
5.42
mw
49.17 kDa
protein length
442 aa Sequence Blast
gene length
1329 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    1,549,465 1,550,793

    The protein

    Protein family

  • C-terminal part: phoH family (with [protein|6BF4F99DEF2E032A8547B920086305775D04FACF|PhoH], according to UniProt)

    • Paralogous protein(s)

  • [protein|6BF4F99DEF2E032A8547B920086305775D04FACF|PhoH]:

    • Structure

  • [PDB|3B85] (aa 233-399, from Corynebacterium glutamicum, 38% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|5913ABC121A03644897BD365D7E507661CD3AF39|ylaK]-[gene|F31DD310F0D80ECC7C6D1E5DDB8EAF32565A3D51|ylaM]
    description
    [pubmed|22383849]
    regulation
    expressed during [SW|sporulation] [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A540 (ylaK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/540 NBRP B. subtilis, Japan]
  • BKE14810 ([gene|5913ABC121A03644897BD365D7E507661CD3AF39|ylaK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGTCTCAGCCTCCTGATA, downstream forward: _UP4_CTTGCAGCTGATTTGCTGTA
  • BKK14810 ([gene|5913ABC121A03644897BD365D7E507661CD3AF39|ylaK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGTCTCAGCCTCCTGATA, downstream forward: _UP4_CTTGCAGCTGATTTGCTGTA

    • References

  • 12762842,12107147