SubtiBank SubtiBank
yqiC [2019-08-07 11:13:25]
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yqiC [2019-08-07 11:13:25]

similar to exodeoxyribonuclease VII (small subunit)
locus
BSU_24290
pI
4.21
mw
6.14 kDa
protein length
84 aa Sequence Blast
gene length
255 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.8|Genetics/ other/ based on similarity]

    • Gene

    Coordinates
    2,526,669 2,526,923

    The protein

    Catalyzed reaction/ biological activity

  • Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates (according to Swiss-Prot)

    • Protein family

  • xseB family (single member, according to UniProt)

    • [SW|Localization]

  • cytoplasm (according to Swiss-Prot), Cytoplasm (Homogeneous) [Pubmed|16479537]

    • Biological materials

    Mutant

  • BKE24290 ([gene|5815A073CDF3856E9A0B52FB35F74DA16B8D1F53|yqiC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE24290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTTTCATTTTTTTTCACGT, downstream forward: _UP4_TTCAGTGTTCAGGAGGAAGA
  • BKK24290 ([gene|5815A073CDF3856E9A0B52FB35F74DA16B8D1F53|yqiC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK24290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTTTCATTTTTTTTCACGT, downstream forward: _UP4_TTCAGTGTTCAGGAGGAAGA

    • References

  • 16479537