SubtiBank SubtiBank
ybgG [2018-04-02 15:14:30]
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ybgG [2018-04-02 15:14:30]

locus
BSU02410
pI
4.86
mw
34.58 kDa
protein length
315 aa Sequence Blast
gene length
945 bp Sequence Blast
function
unknown
product
similar to homocysteine methyltransferase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.3|Amino acid/ nitrogen metabolism] → [category|SW 2.3.1|Biosynthesis/ acquisition of amino acids] → [category|SW 2.3.1.11|Biosynthesis/ acquisition of methionine/ S-adenosylmethionine/ based on similarity]

    • Gene

    Coordinates
    261,656 → 262,603

    The protein

    Structure

  • [PDB|5DML] (from ''Escherichia Coli'', 52% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|577723B2BF662A44D55DC84444ED64276D8DED17|ybgG]
    description
    [Pubmed|15995196]
    view in new tab

    genes
    [gene|577723B2BF662A44D55DC84444ED64276D8DED17|ybgG]-[gene|B6A920650919D5BBBD75CCA58C30A0D8ECE64DA3|ybgF]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B941 (ybgG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1940 NBRP B. subtilis, Japan]
  • BKE02410 (Δ[gene|577723B2BF662A44D55DC84444ED64276D8DED17|ybgG]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGAATGTACCGATGCCT, downstream forward: _UP4_TGACTTATCGGAATAGTTTG
  • BKK02410 (Δ[gene|577723B2BF662A44D55DC84444ED64276D8DED17|ybgG]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGAATGTACCGATGCCT, downstream forward: _UP4_TGACTTATCGGAATAGTTTG

    • References

  • 11267663,15995196,9882684,11898408