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xynC [Tue Dec 13 2016 11:16:33 GMT+0100 (CET)]
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xynC [Tue Dec 13 2016 11:16:33 GMT+0100 (CET)]

endo-xylanase, preference for methylglucurono-xylan
locus
BSU18150
pI
9.08
mw
47.00 kDa
function
xylan degradation
product
endo-xylanase
essential
no
ec
3.2.1.136
synonyms
ynfF

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.27|Utilization of other polymeric carbohydrates]
  • [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|utilization of specific carbon sources]
  • This gene is a member of the following [SW|regulons]

  • [SW|AbrB regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    1,942,714 -> 1,943,982

    The protein

    Catalyzed reaction/ biological activity

  • Endohydrolysis of (1->4)-beta-D-xylosyl links in some glucuronoarabinoxylans (according to Swiss-Prot)
  • Protein family

  • glycosyl hydrolase 30 family (according to Swiss-Prot)
  • Structure

  • [PDB|3GTN] [Pubmed|19407387,21256135]
  • [SW|Localization]

  • extracellular (signal peptide) [Pubmed|18957862]
  • Expression and Regulation

    Operon

  • ''[protein|search|xynD]-[protein|search|xynC]'' [Pubmed|20817675]
  • Regulatory mechanism

  • [protein|search|AbrB]: transcription repression [Pubmed|20817675]
  • References

    Reviews

  • 20735481
  • Original publications

  • 19407387,18957862,17028274,20817675,21256135,24271172