xynC [Tue Dec 13 2016 11:16:33 GMT+0100 (CET)]

endo-xylanase, preference for methylglucurono-xylan

locus: BSU18150

pI: 9.08

mw: 47.00 kDa

function: xylan degradation

product: endo-xylanase

essential: no

ec: 3.2.1.136

synonyms: ynfF

Genomic Context

categories

• [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.27|Utilization of other polymeric carbohydrates]
• [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]

[SW|Categories] containing this gene/protein

• [SW|utilization of specific carbon sources]

This gene is a member of the following [SW|regulons]

• [SW|AbrB regulon]

Gene

Coordinates on the chromosome (coding sequence): 1,942,714 -> 1,943,982

The protein

Catalyzed reaction/ biological activity

• Endohydrolysis of (1->4)-beta-D-xylosyl links in some glucuronoarabinoxylans (according to Swiss-Prot)

Protein family

• glycosyl hydrolase 30 family (according to Swiss-Prot)

Structure

• [PDB|3GTN] [Pubmed|19407387,21256135]

[SW|Localization]

• extracellular (signal peptide) [Pubmed|18957862]

Expression and Regulation

Operon

• ''[protein|search|xynD]-[protein|search|xynC]'' [Pubmed|20817675]

Regulatory mechanism

• [protein|search|AbrB]: transcription repression [Pubmed|20817675]

References

Reviews

• 20735481

Original publications

• 19407387,18957862,17028274,20817675,21256135,24271172