yjcA [2019-06-27 14:49:34]

unknown

locus: BSU11790

pI: 4.81

mw: 12.90 kDa

protein length: 118 aa

gene length: 357 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 1,252,177 1,252,533

The protein

Protein family

• UPF0713 family (according to Swiss-Prot)

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|53898B42C9B09C87F2EE23BAA3433E93DC2DA42E|yjcA]
  description: [Pubmed|14523132]

  sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|14523132,15699190], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

  regulation

  • expressed during sporulation in the mother cell [Pubmed|14523132,15699190]

Biological materials

Mutant

• MGNA-B294 (yjcA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1293 NBRP B. subtilis, Japan]
• BKE11790 ([gene|53898B42C9B09C87F2EE23BAA3433E93DC2DA42E|yjcA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTCGTTCACTCCTTTGCC, downstream forward: _UP4_TAAGGCGTTACCACCAGCAA
• BKK11790 ([gene|53898B42C9B09C87F2EE23BAA3433E93DC2DA42E|yjcA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTCGTTCACTCCTTTGCC, downstream forward: _UP4_TAAGGCGTTACCACCAGCAA

References

• 14523132,15699190