SubtiBank SubtiBank
epsO
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epsO

similar to pyruvyltransferase, extracellular polysaccharide synthesis
Locus
BSU_34220
Isoelectric point
9.63
Molecular weight
37.12 kDa
Protein length
322 aa Sequence Blast
Gene length
969 bp Sequence Blast
Function
biofilm formation
Product
unknown
Essential
no
Synonyms
yvfF

Genomic Context

      
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Categories containing this gene/protein

Gene

Coordinates
3,514,115 3,515,083

The protein

Protein family

  • polysaccharide pyruvyl transferase family (with EpsI and YxaB, according to UniProt)
  • Structure

  • 5AX7 (from yeast, corresponds to aa 79 ... 303, 30% identity) PubMed
  • Expression and Regulation

    Operons

    Description

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon
  • Regulatory mechanism

  • RemA: activation, PubMed, in RemA regulon
  • AbrB: repression, PubMed, in AbrB regulon
  • SinR: anti-activation, (prevents binding of RemA) PubMed, in SinR regulon
  • EAR riboswitch: processive antitermination, in EAR riboswitch
  • Regulation

  • repressed by SinR PubMed
  • Additional information

  • induction by sequestration of SinR by SinI or SlrA PubMed
  • expression is increased in rsiX mutants PubMed
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    Biological materials

    Mutant

  • MGNA-B608 (yvfF::erm), available at the NBRP B. subtilis, Japan
  • BKE34220 (epsO::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GGACAGTTTCTGTTTCAGGC, downstream forward: _UP4_CCTGCTCACATGTGAGCGGA
  • BKK34220 (epsO::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GGACAGTTTCTGTTTCAGGC, downstream forward: _UP4_CCTGCTCACATGTGAGCGGA
  • Labs working on this gene/protein

  • Richard Losick, Harvard Univ., Cambridge, USA homepage
  • References

    Reviews

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    Research papers

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    The EAR RNA switch

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