SubtiBank SubtiBank
yisX [2020-04-17 16:45:46]
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yisX [2020-04-17 16:45:46]

unknown
locus
BSU_10890
pI
5.05
mw
23.58 kDa
protein length
212 aa Sequence Blast
gene length
639 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    1,168,199 1,168,837

    The protein

    [SW|Domains]

  • 3 Pentapeptide repeat domains (aa 63-102, aa 103-142, aa 143-182) (according to UniProt)

    • Structure

  • [PDB|6FLS] (from Clostridium botulinum, corresponds to aa 28 ... 235, 24% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|5237C86931876179C9CE67A9B04A0A62ADA7C25C|yisX]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B193 (yisX::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1192 NBRP B. subtilis, Japan]
  • BKE10890 ([gene|5237C86931876179C9CE67A9B04A0A62ADA7C25C|yisX]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTGATGACATCCTTTGC, downstream forward: _UP4_GGAGCTGTCATCGTATAACC
  • BKK10890 ([gene|5237C86931876179C9CE67A9B04A0A62ADA7C25C|yisX]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTGATGACATCCTTTGC, downstream forward: _UP4_GGAGCTGTCATCGTATAACC