SubtiBank SubtiBank
yneN [2019-05-21 17:53:22]
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yneN [2019-05-21 17:53:22]

similar to thiol:disulfide oxidoreductase
Locus
BSU18010
Isoelectric point
7.86
Molecular weight
19.23 kDa
Protein length
170 aa Sequence Blast
Gene length
513 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Metabolism → Electron transport and ATP synthesis → Electron transport/ other/ based on similarity
  • Groups of genes → Membrane proteins

    • Gene

    Coordinates
    1,929,481 1,929,993

    The protein

    Protein family

  • Thioredoxin family (according to UniProt)

    • Paralogous protein(s)

  • ResA, StoA

    • Structure

  • 3ERW (StoA, 34% identity, aa 42-165) PubMed

    • Expression and Regulation

    Operons

    Genes
    citB-yneN
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

    • Regulatory mechanism

  • CodY: repression, PubMed, in CodY regulon
  • CcpC: repression, (molecular inducer: citrate) PubMed PubMed, in CcpC regulon
  • CcpA: repression, PubMed, in CcpA regulon

    • Regulation

  • expressed upon transition into the stationary phase (AbrB) PubMed, indirect negative regulation by AbrB PubMed
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    Other regulations

  • FsrA: translation repression, PubMed

    • Biological materials

    Mutant

  • MGNA-B392 (yneN::erm), available at the NBRP B. subtilis, Japan
  • 1A921 ( yneN::erm), PubMed, available at BGSC
  • BKE18010 (yneN::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATGCCACCTCCGCAGCA, downstream forward: _UP4_TAGATTCAGTTTTTTTTATA
  • BKK18010 (yneN::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATGCCACCTCCGCAGCA, downstream forward: _UP4_TAGATTCAGTTTTTTTTATA

    • References

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