SubtiBank SubtiBank
yutJ [2019-06-27 15:33:19]
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yutJ [2019-06-27 15:33:19]

putative NADH dehydrogenase
locus
BSU32200
pI
5.82
mw
36.75 kDa
protein length
355 aa Sequence Blast
gene length
1068 bp Sequence Blast
function
unknown
product
putative NADH dehydrogenase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.4|Electron transport/ other/ based on similarity]

    • Gene

    Coordinates
    3,308,867 3,309,934

    The protein

    [SW|Cofactors]

  • FAD (according to UniProt) [Pubmed|21635694]

    • Structure

  • [PDB|4XDB] (Ndh from ''S. aureus'', 24% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|5044FDBEC8D81D1978DB431F9222902FCD80DD2D|yutJ]
    description
    [Pubmed|22383849]
    view in new tab

    additional information

  • the mRNA is cleaved by [protein|BAB297D18F94FFA67B8D12A684AB4D1BCDFB4981|RNase III] [PubMed|26883633]

    • Biological materials

    Mutant

  • MGNA-B575 (yutJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1574 NBRP B. subtilis, Japan]
  • BKE32200 ([gene|5044FDBEC8D81D1978DB431F9222902FCD80DD2D|yutJ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE32200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGAATTCCCCTTTAAT, downstream forward: _UP4_TAATGATAGAGAAGAACCGC
  • BKK32200 ([gene|5044FDBEC8D81D1978DB431F9222902FCD80DD2D|yutJ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK32200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGAATTCCCCTTTAAT, downstream forward: _UP4_TAATGATAGAGAAGAACCGC

    • References

  • 17015645,26883633