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ytrE [2020-08-25 12:59:24]
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ytrE [2020-08-25 12:59:24]

ABC transporter (ATP-binding protein)
Locus
BSU_30420
Isoelectric point
5.98
Molecular weight
25.31 kDa
Protein length
231 aa Sequence Blast
Gene length
696 bp Sequence Blast
Function
unknown
Product
ABC transporter (ATP-binding protein)
Essential
no
Synonyms

Genomic Context

      
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Categories containing this gene/protein

Gene

Coordinates
3,115,279 3,115,974

The protein

Protein family

  • ABC transporter superfamily (according to UniProt)
  • Paralogous protein(s)

    Domains

  • ABC transporter domain (aa 4-231) (according to UniProt)
  • Structure

  • 1L2T (from Methanocaldococcus jannaschii, 44% identity) PubMed
  • Localization

  • cell membrane (via YtrC-YtrD) PubMed
  • Expression and Regulation

    Operons

    Description

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon
  • Regulatory mechanism

  • YtrA: repression, PubMed, in YtrA regulon
  • Regulation

  • expressed early in the stationary phase PubMed
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    Biological materials

    Mutant

  • GP2646 Δ(ytrG-ytrA-ytrB-ytrC-ytrD-ytrE-ytrF)::ermC, available in Jörg Stülke's lab
  • MGNA-B537 (ytrE::erm), available at the NBRP B. subtilis, Japan
  • BKE30420 (ytrE::erm trpC2) available at BGSC and in Jörg Stülke's lab, PubMed, upstream reverse: _UP1_ATCAATCATATGTTCTCTCT, downstream forward: _UP4_GGTGTGCTAAAAGGAGGAAT
  • BKK30420 (ytrE::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_ATCAATCATATGTTCTCTCT, downstream forward: _UP4_GGTGTGCTAAAAGGAGGAAT
  • References

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