SubtiBank SubtiBank
yomS [2019-11-11 15:09:08]
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yomS [2019-11-11 15:09:08]

similar to phage-related lytic exoenzyme
locus
BSU_21240
pI
4.33
mw
12.76 kDa
protein length
118 aa Sequence Blast
gene length
357 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

    • Gene

    Coordinates
    2,242,056 2,242,412

    The protein

    Paralogous protein(s)

  • [protein|D55168C206F2B6B79F9F8FCA90A757F6CCE39849|YqxG]: 33% identity to the C-terminal part of [protein|D55168C206F2B6B79F9F8FCA90A757F6CCE39849|YqxG]
  • [protein|27BB6659541BA5368DEDB19EADCD372CE41244F5|XepA]: 38% identity to the C-terminal part of [protein|27BB6659541BA5368DEDB19EADCD372CE41244F5|XepA]

    • Biological materials

    Mutant

  • BKE21240 ([gene|4F4F48730C97FBEEEAE6B4080D2DD324C575633E|yomS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACAACTCCACCTCCTTAA, downstream forward: _UP4_GTTAAAGGGATTGTGGTGAG
  • BKK21240 ([gene|4F4F48730C97FBEEEAE6B4080D2DD324C575633E|yomS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACAACTCCACCTCCTTAA, downstream forward: _UP4_GTTAAAGGGATTGTGGTGAG