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yubC [2019-07-09 11:27:23]
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yubC [2019-07-09 11:27:23]

cysteine dioxygenase
locus
BSU31140
pI
5.05
mw
17.98 kDa
protein length
161 aa Sequence Blast
gene length
486 bp Sequence Blast
function
unknown
product
cysteine dioxygenase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,193,863 3,194,348

    The protein

    Catalyzed reaction/ biological activity

  • L-cysteine + O2 = 3-sulfinoalanine (according to Swiss-Prot)

    • Protein family

  • cysteine dioxygenase family (according to Swiss-Prot)

    • Structure

  • [PDB|3EQE]
  • [http://pdb.org/pdb/explore/explore.do?structureId=4qm8 4QM8] [Pubmed|25307852], [PDB|4QM9] (from Bacillus Subtilis 100% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|4F296CA0094B8618224F998E1B382470EECEAB3C|yubC]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A225 (yubC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/225 NBRP B. subtilis, Japan]
  • BKE31140 ([gene|4F296CA0094B8618224F998E1B382470EECEAB3C|yubC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE31140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCGTTTTTGCCTCCCTT, downstream forward: _UP4_TGATTGACAGATAAACTGCT
  • BKK31140 ([gene|4F296CA0094B8618224F998E1B382470EECEAB3C|yubC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK31140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCGTTTTTGCCTCCCTT, downstream forward: _UP4_TGATTGACAGATAAACTGCT

    • References

  • 25307852,22383849