amyC [Tue Dec 13 2016 11:16:35 GMT+0100 (CET)]

probably ABC transporter for melibiose

locus: BSU30290

pI: 9.85

mw: 30.00 kDa

function: probably melibiose uptake

product: sugar ABC transporter

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.1|Uptake of carbon sources]
• [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.21|Utilization of melibiose]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

[SW|Categories] containing this gene/protein

• [SW|ABC transporters], [SW|utilization of specific carbon sources], [SW|membrane proteins], [SW|sporulation proteins]

This gene is a member of the following [SW|regulons]

• [SW|CcpA regulon]

Gene

Coordinates on the chromosome (coding sequence): 3,100,031 -> 3,100,861

The protein

[SW|Localization]

• cell membrane [Pubmed|10092453]

[SW|Interactions]

• ([protein|search|AmyC]-[protein|search|AmyD])-[protein|search|MsmE] [Pubmed|10092453]

Expression and Regulation

Operon

• ''[protein|search|msmR]-[protein|search|msmE]-[protein|search|amyD]-[protein|search|amyC]-[protein|search|melA]'' [Pubmed|22383849]
• ''[protein|search|msmE]-[protein|search|amyD]-[protein|search|amyC]-[protein|search|melA]'' [Pubmed|22383849]

[SW|Sigma factor]

• ''[protein|search|msmR]'': [protein|search|SigA] [Pubmed|22900538]

Regulation

• [protein|search|MsmR]
• repressed by glucose ([protein|search|CcpA]) [Pubmed|22900538]

Regulatory mechanism

• [protein|search|CcpA]: transcription repression [Pubmed|22900538]

References

• 10092453,22383849,22900538