SubtiBank SubtiBank
yvyC
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yvyC

similar to flagellar protein
locus
BSU_35350
pI
4.70
mw
12.89 kDa
protein length
109 aa Sequence Blast
gene length
330 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
yviH
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.1|Motility and chemotaxis] → [category|SW 4.1.1.3|Flagellar proteins/ based on similarity]

    • Gene

    Coordinates
    3,634,425 3,634,754

    The protein

    Structure

  • [PDB|2HC5] (NMR)

    • Expression and Regulation

    Operons

    genes
    [gene|4DBF4635B5C5A7541E8F97440D139DAA02547B99|yvyC]-[gene|C6012DEA301DF5B2DDD7E673A736BD3E5163F209|fliD]-[gene|4882FAD988FEDD0E72E4CAFB10C8DE61DDAC23B0|fliS]-[gene|4DE156D248FAF7DE3ED9AC35F006B5319A3C1BDA|fliT]-[gene|A6E7212D159F076F5D26F9C02F340B40C3667623|smiA]-[gene|06FEA5F205B40DD5CF8D9F1328E940D4543F4741|S1350]-[gene|37B8B671B84266A7D65B90A9077A0DFF458D1851|hpf]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD]: sigma factor, [Pubmed|26577401], in [regulon|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD regulon]
    • view in new tab

    genes
    [gene|4DBF4635B5C5A7541E8F97440D139DAA02547B99|yvyC]-[gene|C6012DEA301DF5B2DDD7E673A736BD3E5163F209|fliD]-[gene|4882FAD988FEDD0E72E4CAFB10C8DE61DDAC23B0|fliS]-[gene|4DE156D248FAF7DE3ED9AC35F006B5319A3C1BDA|fliT]
    description
    [Pubmed|8195064]

    sigma factors

  • [protein|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD]: sigma factor, [Pubmed|8195064], in [regulon|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD regulon]
    • view in new tab

    Biological materials

    Mutant

  • BKE35350 ([gene|4DBF4635B5C5A7541E8F97440D139DAA02547B99|yvyC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTGATCATCCCCTATGC, downstream forward: _UP4_AAGTAGAATAGGAGTGGTTT
  • BKK35350 ([gene|4DBF4635B5C5A7541E8F97440D139DAA02547B99|yvyC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTGATCATCCCCTATGC, downstream forward: _UP4_AAGTAGAATAGGAGTGGTTT

    • References

  • 8195064,19455708