SubtiBank SubtiBank
ydcQ
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ydcQ

coupling protein, part of the type IV secretion system for DNA transfer
Locus
BSU_04860
Isoelectric point
9.28
Molecular weight
54.57 kDa
Protein length
480 aa Sequence Blast
Gene length
1443 bp Sequence Blast
Function
conjugative transfer of ICEBs1
Product
coupling protein, part of the type IV secretion system for DNA transfer
Essential
no
Synonyms
conQ
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Prophages and mobile genetic elements → Mobile genetic elements → ICEBs1
  • Groups of genes → Membrane proteins

    • Gene

    Coordinates
    533,338 534,780

    The protein

    Domains

  • FtsK domain (aa 217-399) (according to UniProt)

    • Structure

  • 6O1X (from Clostridium perfringens, corresponds to aa 219 ... 396, 27% identity)

    • Localization

  • cell membrane (according to UniProt)

    • Expression and Regulation

    Operons

    Genes
    xis-ydzL-ydcO-ydcP-ydcQ-nicK-S172-ydcS-ydcT-yddA-conB-conC-conD-conE-yddF-conG-cwlT-yddI-yddJ
    Description
    PubMed

    Regulatory mechanism

  • ImmR: repression, PubMed, in ImmR regulon

    • Regulation

  • strongly induced in the presence of salt (1.2 M NaCl) PubMed
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    Biological materials

    Mutant

  • BKE04860 (ydcQ::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATACATCACCCGCCTGC, downstream forward: _UP4_AGCGGCGAAGGAGTGAGCGA
  • BKK04860 (ydcQ::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATACATCACCCGCCTGC, downstream forward: _UP4_AGCGGCGAAGGAGTGAGCGA

    • References

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