SubtiBank SubtiBank
yoaM [2018-11-01 16:04:48]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yoaM [2018-11-01 16:04:48]

unknown
locus
BSU18660
pI
5.95
mw
26.08 kDa
protein length
227 aa Sequence Blast
gene length
681 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

    • Gene

    Coordinates
    2,036,039 → 2,036,722

    The protein

    Protein family

  • polysaccharide lyase 1 family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|9459834886B4943D514137F0E51536C771154183|YoqW], [protein|B01C362825EB84DAD70CAF2C2500DE7D3EE68E5C|YobE]

    • Structure

  • [PDB|5KO9] (human protein, 29% identity)

    • [SW|Localization]

  • secreted (according to Swiss-Prot)

    • Biological materials

    Mutant

  • MGNA-A841 (yoaM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/841 NBRP B. subtilis, Japan]
  • BKE18660 (Δ[gene|46FCB8FC703E61ED6578DFE4D3FC01B9421F8247|yoaM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCCATCATCCTTTTTA, downstream forward: _UP4_TAGTGATTGAAAAAATTCTC
  • BKK18660 (Δ[gene|46FCB8FC703E61ED6578DFE4D3FC01B9421F8247|yoaM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCCATCATCCTTTTTA, downstream forward: _UP4_TAGTGATTGAAAAAATTCTC