ywoB [2019-06-12 10:40:03]

unknown

locus: BSU36500

pI: 10.11

mw: 17.29 kDa

protein length: 154 aa

gene length: 465 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,756,044 3,756,508

The protein

[SW|Localization]

• cell membrane (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|42FD1230682897172C3D4EA09980E566835EEF34|ywoB]-[gene|ECBA7A0C8E705A464ACF627EBAFF7482EAEE34F2|ywoC]-[gene|856247843F1073833D51F82AB2928CCDC0DA3E64|ywoD]
  description: [Pubmed|21856850]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|21856850], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

  regulatory mechanism

  • [protein|6A074CE9AD98A2751A216A2EA8156ACE6FFC7280|YtrA]: repression, [Pubmed|21856850], in [regulon|6A074CE9AD98A2751A216A2EA8156ACE6FFC7280|YtrA regulon]

  regulation

  • induced by ramoplanin ([protein|search|YtrA]) [Pubmed|21856850]

Biological materials

Mutant

• MGNA-A944 (ywoB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/944 NBRP B. subtilis, Japan]
• BKE36500 ([gene|42FD1230682897172C3D4EA09980E566835EEF34|ywoB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACATCCCCCTCAGTGTA, downstream forward: _UP4_TGACGCCCTTTATGATTACA
• BKK36500 ([gene|42FD1230682897172C3D4EA09980E566835EEF34|ywoB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACATCCCCCTCAGTGTA, downstream forward: _UP4_TGACGCCCTTTATGATTACA