SubtiBank SubtiBank
yddN [2018-01-27T18:51:15.000Z]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yddN [2018-01-27T18:51:15.000Z]

similar to alkanal monooxygenase
locus
BSU05040
pI
5.19
mw
37.88 kDa
protein length
339 aa Sequence Blast
gene length
1017 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    550,240 → 551,259

    The protein

    Paralogous protein(s)

  • [protein|1432F56AD3D2B2BD82D8759CE4DC42C0D40C49C0|YceB], [protein|A36E7D50E2EBD0F0109491FF2CAD2CA84372B2CF|YvbT]

    • [SW|Cofactors]

  • FMN or FAD [Pubmed|21635694]

    • Structure

  • [PDB|4US5] (from ''Streptomyces bottropensis'', 30% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|40654E556CC97A4E47FC757F93F29BEACD21CC3A|yddN]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C124 (yddN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2122 NBRP B. subtilis, Japan]
  • BKE05040 (Δ[gene|40654E556CC97A4E47FC757F93F29BEACD21CC3A|yddN]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAATTTCACCTCTAAAAT, downstream forward: _UP4_TAGAAATCGAGTCAGTTGTA
  • BKK05040 (Δ[gene|40654E556CC97A4E47FC757F93F29BEACD21CC3A|yddN]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAATTTCACCTCTAAAAT, downstream forward: _UP4_TAGAAATCGAGTCAGTTGTA