ypmT

unknown

locus: BSU_21720

pI: 8.81

mw: 7.59 kDa

protein length: 64 aa

gene length: 195 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 2,290,078 2,290,272

The protein

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|0337C7B1CFA1C59710A7E6463A370F8C39AAC8EA|sco]-[gene|4722C78DB10289939145BDD079661021160C688C|ypmR]-[gene|6E668E7BCD26FCC9873D538385DAF851D7CEC8FC|ypmS]-[gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
  description: [Pubmed|22383849]

• genes: [gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
  description: (according to [http://dbtbs.hgc.jp/COG/prom/ypmT.html DBTBS]) null

  additional information

  • the terminator is [protein|search|NusA]-dependent [ http://www.nature.com/articles/nmicrobiol20157 Reference]

• genes: [gene|4722C78DB10289939145BDD079661021160C688C|ypmR]-[gene|6E668E7BCD26FCC9873D538385DAF851D7CEC8FC|ypmS]-[gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B272 (ypmT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1271 NBRP B. subtilis, Japan]
• BKE21720 ([gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCAGTCACCTCTATT, downstream forward: _UP4_TGAAAAAAGAGACATGAAAC
• BKK21720 ([gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCAGTCACCTCTATT, downstream forward: _UP4_TGAAAAAAGAGACATGAAAC