SubtiBank SubtiBank
yqkA
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yqkA

unknown
locus
BSU_23670
pI
8.16
mw
38.88 kDa
protein length
343 aa Sequence Blast
gene length
1032 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,462,193 2,463,224

    The protein

    Protein family

  • C-terminal part: UPF0157 (GrpB) family (single member, according to UniProt)

    • [SW|Domains]

  • N-terminal [SW|N-acetyltransferase domain] (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|5B8A6D282E34683726BD6C36E09A6C36E8F99795|yqjY]-[gene|9F88AC3A792F4EE8AA853849BBCF5065717B1D8B|yqjZ]-[gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]-[gene|DC1C1D4BE1A7F4E28792A2B8273AFE2C7F90E58C|yqkB]-[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|F0BC150F59730E64BA9AB3F979544EF6B5CC4E9E|polY2]-[gene|9BC3DF46C944A0FD5CAAB4513C4AF00EFC5FC8D5|yqjX]-[gene|5B8A6D282E34683726BD6C36E09A6C36E8F99795|yqjY]-[gene|9F88AC3A792F4EE8AA853849BBCF5065717B1D8B|yqjZ]-[gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]-[gene|DC1C1D4BE1A7F4E28792A2B8273AFE2C7F90E58C|yqkB]-[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]
    description
    [Pubmed|22383849]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|15469515,16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • induced upon DNA damage ([protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]) [Pubmed|15469515,16267290]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-C407 (yqkA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2405 NBRP B. subtilis, Japan]
  • BKE23670 ([gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTCAATCATTCGTGTTCTC, downstream forward: _UP4_TTATGAACATACATGTGACA
  • BKK23670 ([gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTCAATCATTCGTGTTCTC, downstream forward: _UP4_TTATGAACATACATGTGACA