SubtiBank SubtiBank
valS
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

valS

valyl-tRNA synthetase
locus
BSU_28090
pI
4.87
mw
101.55 kDa
protein length
880 aa Sequence Blast
gene length
2643 bp Sequence Blast
function
translation
product
valyl-tRNA synthetase
essential
yes
ec
6.1.1.9
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.10|Aminoacyl-tRNA synthetases]
  • [category|SW 6|Groups of genes] → [category|SW 6.1|Essential genes]
  • [category|SW 6|Groups of genes] → [category|SW 6.11|Efp-dependent proteins]

    • Gene

    Coordinates
    2,866,664 2,869,306

    Phenotypes of a mutant

  • essential [Pubmed|12682299]

    • The protein

    Catalyzed reaction/ biological activity

  • ATP + L-valine + tRNA(Val) --> AMP + diphosphate + L-valyl-tRNA(Val) (according to UniProt)

    • Protein family

  • [SW|Class-I aminoacyl-tRNA synthetase family] (according to UniProt)

    • Structure

  • [PDB|1IYW] (from ''Thermus thermophilus'', 41% identity, 60% similarity) [Pubmed|12554880]

    • additional information

  • belongs to the 100 [SW|most abundant proteins] [PubMed|15378759]

    • Expression and Regulation

    Operons

    genes
    [gene|3E84B3AC08D0B314286CEF38534BD81B568F3E0E|valS]-[gene|80502F76F076C08CCE702F25095C06D14CD8154A|folC]
    description
    [Pubmed|9098041]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|9098041], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [regulon|T-box|T-box]: transcription termination/antitermination, via [SW|riboswitch], in [regulon|T-box|T-box]

    • regulation

  • induced by valine limitation ([SW|T-box]) [Pubmed|9098041,19258532]
  • the [SW|T-box] RNA is degraded by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] [pubmed|29794222]
    • view in new tab

    additional information

  • [protein|search|translation] is likely to require [protein|3054CD45713BBD69C2A528DE24AF6AF37175FD9D|Efp] due to the presence of several consecutive proline residues [PubMed|23239624,23239623]

    • References

    Reviews

  • 19258532

    • Original Publications

  • 9098041,15378759,25310979,29794222