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yukD [2019-01-31 17:18:18]
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yukD [2019-01-31 17:18:18]

Ubiquitin-like protein, part of the type VII protein secretion system YukD-YukC-YukB-YueB-YueC, putative bacteriocin
Locus
BSU31900
Isoelectric point
6.31
Molecular weight
8.94 kDa
Protein length
79 aa Sequence Blast
Gene length
240 bp Sequence Blast
Function
export of YukE
Product
ubiquitin-like protein, part of the type VII protein secretion system, putative bacteriocin
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → Protein synthesis, modification and degradation → Protein secretion
  • Lifestyles → Coping with stress → Biosynthesis of antibacterial compounds/ based on similarity

    • Gene

    Coordinates
    3,275,832 3,276,071

    Phenotypes of a mutant

  • loss of secretion of YukE PubMed

    • The protein

    Structure

  • 2BPS

    • Expression and Regulation

    Operons

    Genes
    yukE-yukD-yukC-yukB-yueB-yueC-yueD
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

    • Regulatory mechanism

  • DegU: activation, DegU-P, PubMed, in DegU regulon

    • Regulation

  • expressed in the stationary phase PubMed
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    Biological materials

    Mutant

  • MGNA-A627 (yukD::erm), available at the NBRP B. subtilis, Japan
  • BKE31900 (yukD::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTAGGATCACCCTTACA, downstream forward: _UP4_ATATTATGAAAGGATCTGGT
  • BKK31900 (yukD::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTAGGATCACCCTTACA, downstream forward: _UP4_ATATTATGAAAGGATCTGGT

    • References

    Reviews

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    Original publications

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