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efeB [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]
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efeB [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]

elemental iron uptake system, heme peroxidase, converts ferrous iron (Fe(II) to ferric iron (FeIII)) for uptake by EfeO-EfeU, peroxide detoxification under microaerobic conditions
locus
BSU38260
pI
8.00
mw
45.00 kDa
function
ferrous iron conversion
product
heme peroxidase in elemental iron uptake
essential
no
ec
1.11.1.-
synonyms
ipa-29d, ywbN

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.3|Homeostasis] → [category|SW 1.3.3|Acquisition of iron] → [category|SW 1.3.3.2|Elemental iron transport system]
  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.5|Iron metabolism] → [category|SW 2.6.5.5|Elemental iron transport system]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.8|Resistance against oxidative and electrophile stress]
  • [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|acquisition of iron], [SW|iron metabolism], [SW|cell envelope stress proteins (controlled by SigM, V, W, X, Y)], [SW|resistance against oxidative and electrophile stress], [SW|membrane proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|Fur regulon], [SW|SigM regulon], [SW|SigW regulon], [SW|SigX regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    3,926,682 -> 3,927,932

    The protein

    Catalyzed reaction/ biological activity

  • oxidizes ferrous iron to ferric iron for uptake by [protein|search|EfeO]-[protein|search|EfeU] [Pubmed|23764491]
  • eliminates reactive oxygen species that accumulate in the presence of ferrous iron [Pubmed|23764491]
  • peroxide detoxification under microaerobic conditions [Pubmed|23764491]
  • Protein family

  • DyP-type peroxidase family (according to Swiss-Prot)
  • [SW|Cofactors]

  • protoheme IX [Pubmed|23764491]
  • Effectors of protein activity

  • activity is increased in the presence of [protein|search|EfeO] due to the displacement of ferric iron [Pubmed|23764491]
  • Structure

  • [PDB|2Y4F] (from ''E. coli'', 38% identity)
  • [SW|Localization]

  • extracellular, secreted by the [SW|TatAY]-[SW|TatCY] complex [Pubmed|15554971]
  • [SW|TatAY]-[SW|TatCY]-dependent export of [protein|search|EfeB] requires a functional [protein|search|WprA] [Pubmed|23180473]
  • forms a membrane-bound complex with [protein|search|EfeU] and [protein|search|EfeO] for iron uptake [Pubmed|23180473,23764491]
  • attached to the membrane via [protein|search|EfeU] [Pubmed|23764491]
  • [SW|Interactions]

  • [protein|search|EfeO]-[protein|search|EfeU]-[protein|search|EfeB] [Pubmed|23180473,23764491]
  • Expression and Regulation

    Operon

  • ''[protein|search|efeU]-[protein|search|efeO]-[protein|search|efeB]'' [Pubmed|9353933]
  • ''[protein|search|efeB]-[protein|search|ywbO]'' [Pubmed|18179421]
  • [SW|Sigma factor]

  • ''[protein|search|efeU]'': [protein|search|SigA] [Pubmed|23764491]
  • ''[protein|search|efeB]'': [protein|search|SigM] [Pubmed|18179421], [protein|search|SigX], [protein|search|SigW] [Pubmed|9683469]
  • Regulation

  • induced upon iron starvation ([protein|search|Fur]) [Pubmed|12354229]
  • Regulatory mechanism

  • [protein|search|Fur]: transcription repression [Pubmed|12354229]
  • Labs working on this gene/protein

  • [SW|Jan Maarten van Dijl], Groningen, Netherlands
  • References

    Reviews

  • 24140208
  • Original publications

  • 16672620,19180538,12354229,19383693,9353933,9683469,15554971,21479178,18179421,22923395,23180473,23560556,23764491,23820555,24620988,18931290,26239117,27795321