SubtiBank SubtiBank
yfnC [2018-10-04 20:27:27]
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yfnC [2018-10-04 20:27:27]

similar to fosmidmycin resistance protein
locus
BSU07320
pI
9.80
mw
43.33 kDa
protein length
409 aa Sequence Blast
gene length
1227 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.12|Other transporters]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    803,317 → 804,546

    The protein

    Protein family

  • major facilitator superfamily (according to Swiss-Prot)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|3416CB670B861D3F4ECFF87AE6E4397F6D7304FE|yfnC]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C326 (yfnC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2324 NBRP B. subtilis, Japan]
  • BKE07320 (Δ[gene|3416CB670B861D3F4ECFF87AE6E4397F6D7304FE|yfnC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGAGTCTCCTCCTTACA, downstream forward: _UP4_TGAAAAAACCCCTGCCAGGC
  • BKK07320 (Δ[gene|3416CB670B861D3F4ECFF87AE6E4397F6D7304FE|yfnC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGAGTCTCCTCCTTACA, downstream forward: _UP4_TGAAAAAACCCCTGCCAGGC