ypjB [2019-06-07 11:15:04]

unknown

locus: BSU22520

pI: 5.17

mw: 30.43 kDa

protein length: 264 aa

gene length: 795 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 2,361,544 2,362,338

The protein

[SW|Localization]

• cell membrane (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|33C4026ABC642B03D7D857E51677F2DFAA31A144|ypjB]
  description: [Pubmed|8760912]

  sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15699190,12662922], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

  regulatory mechanism

  • [protein|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|SpoIIID]: repression, [Pubmed|15383836], in [regulon|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|SpoIIID regulon]

  regulation

  • expressed earlyduring sporulation in the mother cell ([protein|search|SigE], [SW|SpoIIID]) [Pubmed|15699190,12662922,15383836]

Biological materials

Mutant

• MGNA-A405 (ypjB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/405 NBRP B. subtilis, Japan]
• BKE22520 ([gene|33C4026ABC642B03D7D857E51677F2DFAA31A144|ypjB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCAGGTCCCTCCCACTC, downstream forward: _UP4_TAAGGATGAGGGGCGGCGGT
• BKK22520 ([gene|33C4026ABC642B03D7D857E51677F2DFAA31A144|ypjB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCAGGTCCCTCCCACTC, downstream forward: _UP4_TAAGGATGAGGGGCGGCGGT

References

• 15699190,12662922,15383836