SubtiBank SubtiBank
yqkC [2018-12-09 17:33:07]
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yqkC [2018-12-09 17:33:07]

unknown
locus
BSU23650
pI
4.58
mw
9.15 kDa
protein length
79 aa Sequence Blast
gene length
237 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,461,621 → 2,461,860

    The protein

    [SW|Localization]

  • membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|DC1C1D4BE1A7F4E28792A2B8273AFE2C7F90E58C|yqkB]-[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|5B8A6D282E34683726BD6C36E09A6C36E8F99795|yqjY]-[gene|9F88AC3A792F4EE8AA853849BBCF5065717B1D8B|yqjZ]-[gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]-[gene|DC1C1D4BE1A7F4E28792A2B8273AFE2C7F90E58C|yqkB]-[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|F0BC150F59730E64BA9AB3F979544EF6B5CC4E9E|polY2]-[gene|9BC3DF46C944A0FD5CAAB4513C4AF00EFC5FC8D5|yqjX]-[gene|5B8A6D282E34683726BD6C36E09A6C36E8F99795|yqjY]-[gene|9F88AC3A792F4EE8AA853849BBCF5065717B1D8B|yqjZ]-[gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]-[gene|DC1C1D4BE1A7F4E28792A2B8273AFE2C7F90E58C|yqkB]-[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]
    description
    [Pubmed|22383849]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|15469515,16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • induced upon DNA damage ([protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]) [Pubmed|15469515,16267290]
    • view in new tab

    Biological materials

    Mutant

  • BKE23650 (Δ[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23650 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTTTGTTCCACGTTTCGCG, downstream forward: _UP4_TAACATAAAAAAGCGAAAGA
  • BKK23650 (Δ[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23650 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTTTGTTCCACGTTTCGCG, downstream forward: _UP4_TAACATAAAAAAGCGAAAGA