SubtiBank SubtiBank
yddJ
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yddJ

ICEBs1 exclusion factor
Locus
BSU_04990
Isoelectric point
4.52
Molecular weight
14.54 kDa
Protein length
126 aa Sequence Blast
Gene length
381 bp Sequence Blast
Function
prevention of redundant transfer of ICEBs1 into host cells that already contain a copy of the element
Product
ICEBs1 exclusion factor
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Prophages and mobile genetic elements → Mobile genetic elements → ICEBs1
  • Groups of genes → Membrane proteins

    • Gene

    Coordinates
    545,595 545,975

    The protein

    Localization

  • putative lipoprotein, attached to the cell membrane PubMed

    • Expression and Regulation

    Operons

    Genes
    yddJ
    Description
    PubMed

    Regulatory mechanism

  • AbrB: repression, PubMed, in AbrB regulon
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    Genes
    xis-ydzL-ydcO-ydcP-ydcQ-nicK-S172-ydcS-ydcT-yddA-conB-conC-conD-conE-yddF-conG-cwlT-yddI-yddJ
    Description
    PubMed

    Regulatory mechanism

  • ImmR: repression, PubMed, in ImmR regulon

    • Regulation

  • strongly induced in the presence of salt (1.2 M NaCl) PubMed
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    Biological materials

    Mutant

  • BKE04990 (yddJ::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CAAAATAAACATTACCTCCT, downstream forward: _UP4_TAAACCGTGTGTTTACTCCT
  • BKK04990 (yddJ::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CAAAATAAACATTACCTCCT, downstream forward: _UP4_TAAACCGTGTGTTTACTCCT

    • References

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