SubtiBank SubtiBank
ylbC [2019-09-06 13:06:21]
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ylbC [2019-09-06 13:06:21]

unknown
locus
BSU_14960
pI
7.37
mw
39.48 kDa
protein length
346 aa Sequence Blast
gene length
1041 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • Gene

    Coordinates
    1,566,379 1,567,419

    The protein

    Structure

  • [PDB|4IFA] (from B. anthracis, 44% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|8529D83560E934709B20CCF0B72251A74EC272BB|ylbB]-[gene|2EC813B89149AD39405E66C325FB2684B5987162|ylbC]
    description
    [Pubmed|16497325]

    sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|16497325,15699190], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]

    • regulation

  • expressed during sporulation in the forespore ([protein|search|SigF]) [Pubmed|16497325,15699190]
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    Biological materials

    Mutant

  • MGNA-B243 (ylbC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1242 NBRP B. subtilis, Japan]
  • BKE14960 ([gene|2EC813B89149AD39405E66C325FB2684B5987162|ylbC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14960 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATCTATCACCCCCGTGGC, downstream forward: _UP4_TAATGAAAGCCGCGGACGAA
  • BKK14960 ([gene|2EC813B89149AD39405E66C325FB2684B5987162|ylbC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14960 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATCTATCACCCCCGTGGC, downstream forward: _UP4_TAATGAAAGCCGCGGACGAA

    • References

  • 16497325,15699190