SubtiBank SubtiBank
rhiF
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rhiF

ABC transporter (membrane protein) for rhamnose oligosaccharides
Locus
BSU_06980
Isoelectric point
9.47
Molecular weight
34.46 kDa
Protein length
309 aa Sequence Blast
Gene length
930 bp Sequence Blast
Function
uptake of rhamnose oligosaccharides
Product
rhamnose oligosaccharide ABC transporter
Essential
no
Synonyms
yesP
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Cellular processes → Transporters → ABC transporters → Importers → Uptake of carbon sources
  • Metabolism → Carbon metabolism → Utilization of specific carbon sources → Utilization of pectin
  • Groups of genes → Membrane proteins

    • Gene

    Coordinates
    762,942 763,871

    The protein

    Protein family

  • Binding-protein-dependent transport system permease family (according to UniProt)
  • MalFG subfamily (according to UniProt)

    • Domains

  • ABC transmembrane type-1 domain (aa 80-294) (according to UniProt)

    • Structure

  • 4TQU (from Sphingomonas sp., corresponds to aa 13 - 231, 28% identity) PubMed

    • Localization

  • cell membrane PubMed

    • Expression and Regulation

    Operons

    Genes
    rhiL-rhiF-rhiG-rhiN
    Description
    PubMed

    Regulation

  • induced in colonies growing on steamed soybeans PubMed
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    Biological materials

    Mutant

  • MGNA-A948 (yesP::erm), available at the NBRP B. subtilis, Japan
  • BKE06980 (rhiF::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTGCGTCAGCCCCATTTC, downstream forward: _UP4_TACGAGTCAAAGGAGGAATG
  • BKK06980 (rhiF::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTGCGTCAGCCCCATTTC, downstream forward: _UP4_TACGAGTCAAAGGAGGAATG

    • References

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