yjdF [Tue Dec 13 2016 11:16:32 GMT+0100 (CET)]

unknown

locus: BSU12030

pI: 10.56

mw: 18.00 kDa

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

[SW|Categories] containing this gene/protein

• [SW|proteins of unknown function]

This gene is a member of the following [SW|regulons]

• [SW|ManR regulon]

Gene

Coordinates on the chromosome (coding sequence): 1,275,809 -> 1,276,291

Expression and Regulation

Operon

• ''[protein|search|manP]-[protein|search|manA]-[protein|search|yjdF]'' [Pubmed|20139185]

[SW|Sigma factor]

• [protein|search|SigA] [Pubmed|20139185]

Regulation

• induced by mannose ([protein|search|ManR]) [Pubmed|20139185]
• repressed by glucose ([protein|search|ManR]) [Pubmed|20139185]

Regulatory mechanism

• [protein|search|ManR]: transcription activation in the presence of mannose and absence of glucose [Pubmed|20139185]
• expession may be controlled by a potential [SW|RNA switch] located in the 5' untranslated region of the ''[protein|search|manP]-[protein|search|manA]-[protein|search|yjdF]'' mRNA between'' [protein|search|manA]'' and ''[protein|search|yjdF]'' [Pubmed|20230605]

References

• 20139185,20230605