SubtiBank SubtiBank
yjdF
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yjdF

unknown
Locus
BSU_12030
Isoelectric point
10.56
Molecular weight
18.68 kDa
Protein length
160 aa Sequence Blast
Gene length
483 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Groups of genes → Proteins of unknown function

    • Gene

    Coordinates
    1,275,809 1,276,291

    Expression and Regulation

    Operons

    Genes
    manP-manA-yjdF
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

    • Regulatory mechanism

  • ManR: activation, in the presence of mannose and absence of glucose PubMed, in ManR regulon
  • RNA switch: termination/antitermination, expession may be controlled by a potential RNA switch located in the 5' untranslated region of the manP-manA-yjdF mRNA between manA and yjdF, in RNA switch

    • Regulation

  • induced by mannose (ManR) PubMed
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A268 (yjdF::erm), available at the NBRP B. subtilis, Japan
  • BKE12030 (yjdF::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTCTCAATCATGCATCCG, downstream forward: _UP4_TAATCCAAACAAAAGCAGGC
  • BKK12030 (yjdF::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTCTCAATCATGCATCCG, downstream forward: _UP4_TAATCCAAACAAAAGCAGGC

    • References

    Loading