ytcQ [2017-12-15 10:18:58]

similar to ABC transporter (solute-binding lipoprotein)

locus: BSU30160

pI: 4.96

mw: 55.14 kDa

protein length: 489 aa

gene length: 1467 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.1|Uptake of carbon sources]
• [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.26|Utilization of pectin]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,085,800 → 3,087,296

The protein

Paralogous protein(s)

• [protein|A4DA5C00BA37FF65E4190EC95B183ABAF1C9364D|LplA]

[SW|Localization]

• associated to the membrane (via [protein|87B212C8C61483DF2874762A3B77111616C616A5|YtcP]-[protein|4ED1DD17694A06CFDFF48943BAE8AEC2CCCB0401|YteP]) [Pubmed|10092453]

Expression and Regulation

Operons

• genes: [gene|87B212C8C61483DF2874762A3B77111616C616A5|ytcP]-[gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-A806 (ytcQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/806 NBRP B. subtilis, Japan]
• BKE30160 (Δ[gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTACCCCTCCGTTTCA, downstream forward: _UP4_TAACATTGGAAAAACCCAAA
• BKK30160 (Δ[gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTACCCCTCCGTTTCA, downstream forward: _UP4_TAACATTGGAAAAACCCAAA

References

• 10092453,22383849