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ytxK

similar to SAM-dependent methyltransferase

locus: BSU_29480

pI: 5.41

mw: 37.20 kDa

protein length: 329 aa

gene length: 990 bp

function: DNA modification

product: similar to SAM-dependent DNA-methyltransferase

essential: no

synonyms: ythI

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.8|Genetics/ other/ based on similarity]

Gene

Coordinates: 3,016,646 3,017,635

The protein

Structure

• [PDB|2F8L] (from Listeria monocytogenes, 45% identity)

Expression and Regulation

Operons

• genes: [gene|2501228D435B151F151A3C0EF10DE99A8395977F|tpx]-[gene|2C83EECFA809F34ADCA6445CF2E6BAC730D523DB|ytxK]
  description: [Pubmed|22383849]

  regulatory mechanism

  • [protein|2C6386E9A63F410558D168798D077DF91590F454|Spx]: activation, [pubmed|12642660,19575568], in [regulon|2C6386E9A63F410558D168798D077DF91590F454|Spx regulon]

• genes: [gene|2C83EECFA809F34ADCA6445CF2E6BAC730D523DB|ytxK]
  description: [Pubmed|8226682]

Biological materials

Mutant

• MGNA-A114 (ytxK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/114 NBRP B. subtilis, Japan]
• BKE29480 ([gene|2C83EECFA809F34ADCA6445CF2E6BAC730D523DB|ytxK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTGTGTTCCTCCTTGC, downstream forward: _UP4_TAAGTGTTTTAAAAGCAGCT
• BKK29480 ([gene|2C83EECFA809F34ADCA6445CF2E6BAC730D523DB|ytxK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTGTGTTCCTCCTTGC, downstream forward: _UP4_TAAGTGTTTTAAAAGCAGCT

References

• 8226682