SubtiBank SubtiBank
yqbM [2019-06-07 11:26:34]
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yqbM [2019-06-07 11:26:34]

similar to phage-related R-Type bacteriocin tube protein
locus
BSU26060
pI
4.57
mw
16.16 kDa
protein length
147 aa Sequence Blast
gene length
444 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.3|Skin element]

    • Gene

    Coordinates
    2,679,142 2,679,585

    The protein

    Paralogous protein(s)

  • [protein|683D350D98AC0D27951145AD87830B89C0B4F393|XkdM]: 95% identity

    • Structure

  • [PDB|2GUJ] ([protein|683D350D98AC0D27951145AD87830B89C0B4F393|XkdM], 95% identity)

    • [SW|Localization]

  • membrane (according to Swiss-Prot)

    • Biological materials

    Mutant

  • BKE26060 ([gene|298588F646B7271A91DAEEE60967AA4C134A8082|yqbM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTTTGCGCTTTTAATGCCA, downstream forward: _UP4_TAATCACTTTCACGAAAAAT
  • BKK26060 ([gene|298588F646B7271A91DAEEE60967AA4C134A8082|yqbM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTTTGCGCTTTTAATGCCA, downstream forward: _UP4_TAATCACTTTCACGAAAAAT

    • References

    Research papers

  • 30127773