SubtiBank SubtiBank
ydaG
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ydaG

putative pyridoxamine 5'-phosphate oxidase , general stress protein, required for protection against paraquat stress
Locus
BSU_04220
Isoelectric point
5.20
Molecular weight
15.00 kDa
Protein length
140 aa Sequence Blast
Gene length
423 bp Sequence Blast
Function
survival of stress conditions
Product
putative pyridoxamine 5'-phosphate oxidase
Essential
no
Synonyms
yzzA
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Lifestyles → Coping with stress → General stress proteins (controlled by SigB)
  • Lifestyles → Coping with stress → Resistance against oxidative and electrophile stress

    • Gene

    Coordinates
    473,803 474,225

    The protein

    Structure

  • 3DB0 (from Listeria innocua, 43% identity)

    • Expression and Regulation

    Operons

    Genes
    ydaF-ydaG
    Description
    PubMed
    view in new tab

    Genes
    ydaG
    Description
    PubMed

    Sigma factors

  • SigB: sigma factor, PubMed, in SigB regulon

    • Regulation

  • induced under stress conditions (SigB) PubMed
    • view in new tab

    Genes
    ydaD-ydaE-ydaF-ydaG
    Description
    PubMed

    Sigma factors

  • SigB: sigma factor, PubMed, in SigB regulon

    • Regulation

  • induced by stress (SigB) PubMed
    • view in new tab

    Biological materials

    Mutant

  • MGNA-C102 (ydaG::erm), available at the NBRP B. subtilis, Japan
  • BKE04220 (ydaG::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCTCGAATCACTCCTTTT, downstream forward: _UP4_TAAAAAATTTGTGTTTTCAG
  • BKK04220 (ydaG::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCTCGAATCACTCCTTTT, downstream forward: _UP4_TAAAAAATTTGTGTTTTCAG

    • References

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