ydaP [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]

general stress protein, required for survival of ethanol stress, putative pyruvate oxidase

locus: BSU04340

pI: 5.22

mw: 62.00 kDa

function: unknown

product: putative pyruvate oxidase

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

[SW|Categories] containing this gene/protein

• [SW|general stress proteins (controlled by SigB)], [SW|poorly characterized/ putative enzymes]

This gene is a member of the following [SW|regulons]

• [SW|SigB regulon]

Gene

Coordinates on the chromosome (coding sequence): 488,830 -> 490,554

The protein

Paralogous protein(s)

• [protein|search|AlsS], [protein|search|IlvB]

Structure

• [PDB|4KGD] (the enzyme from Lactobacillus plantarum, 37% identity, 70% similarity) [Pubmed|23748673]

Expression and Regulation

Operon

• ''ydaP'' [Pubmed|10220166]

[SW|Sigma factor]

• [protein|search|SigB] [Pubmed|15805528]

Regulation

• induced by stress ([protein|search|SigB]) [Pubmed|15805528]

Biological materials

Mutant

• GP457 (spc), available in [SW|Jörg Stülke]'s lab

References

• 10220166,23748673,15805528,22730460