SubtiBank SubtiBank
ybdO [2017-8-11 16:0:3]
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ybdO [2017-8-11 16:0:3]

unknown
locus
BSU02050
pI
5.36
mw
44.68 kDa
protein length
394 aa Sequence Blast
gene length
1182 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    225,064 → 226,248

    The protein

    [SW|Localization]

  • extracellular (signal peptide) [Pubmed|18957862]

    • Expression and Regulation

    Operons

    genes
    [gene|283FB32C92417EA7DFE86FAC2E7FFBD6165B0A5F|ybdO]
    description
    [Pubmed|15033535]

    sigma factors

  • [protein|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD]: sigma factor, [Pubmed|15033535], in [regulon|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD regulon]

    • regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|18840696], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

    • regulation

  • repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B960 (ybdO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1959 NBRP B. subtilis, Japan]

    • References

  • 18957862,15033535,18840696,12107147