SubtiBank SubtiBank
yeeI [2019-06-25 08:16:15]
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yeeI [2019-06-25 08:16:15]

similar to E. coli YebC putative transcription factor
locus
BSU06840
pI
4.28
mw
26.23 kDa
protein length
239 aa Sequence Blast
gene length
720 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    752,412 753,131

    The protein

    Protein family

  • UPF0082 family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|7F690393007F0BE9BC375256ECC59228AE5174B5|YrbC]

    • Structure

  • [PDB|4F3Q] (YebC from Coxiella burnettii, 44% identity) [pubmed|26033498]

    • Expression and Regulation

    Operons

    genes
    [gene|227EC2A232A989ACE986726BD76CF5648C4CFA19|yeeI]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A952 (yeeI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/952 NBRP B. subtilis, Japan]
  • BKE06840 ([gene|227EC2A232A989ACE986726BD76CF5648C4CFA19|yeeI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATGTTCCACTCTCTTT, downstream forward: _UP4_TAAGGAGTGAGCAGGCTGTT
  • BKK06840 ([gene|227EC2A232A989ACE986726BD76CF5648C4CFA19|yeeI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATGTTCCACTCTCTTT, downstream forward: _UP4_TAAGGAGTGAGCAGGCTGTT

    • References

    Research papers

  • 26033498