ydcF

unknown

locus: BSU_04750

pI: 8.07

mw: 11.10 kDa

protein length: 97 aa

gene length: 294 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 524,492 524,785

The protein

Paralogous protein(s)

• [protein|CA4597C6253CCF7D7954686A30AF041808BDF8E5|Gdh]

Expression and Regulation

Operons

• genes: [gene|20D50DA11B864E6C719CC34BE27C7900893EA054|ydcF]-[gene|89AB146F447696EF1CBE219C9A2FB5CBB380F847|ydcG]-[gene|B7F5FA5C656D39970959BC857E93B78B1A063098|pamR]
  description: [pubmed|29240826,22383849]

  regulatory mechanism

  • [protein|B7F5FA5C656D39970959BC857E93B78B1A063098|PamR]: repression, [pubmed|29240826], in [regulon|B7F5FA5C656D39970959BC857E93B78B1A063098|PamR regulon]

additional information

• the mRNA is very stable (> 15 min) [pubmed|12884008]

Biological materials

Mutant

• MGNA-C113 (ydcF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2111 NBRP B. subtilis, Japan]
• BKE04750 ([gene|20D50DA11B864E6C719CC34BE27C7900893EA054|ydcF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAAATTGTCCTTTC, downstream forward: _UP4_CATCTTTACGGAGGAGTGAT
• BKK04750 ([gene|20D50DA11B864E6C719CC34BE27C7900893EA054|ydcF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAAATTGTCCTTTC, downstream forward: _UP4_CATCTTTACGGAGGAGTGAT

References

• 12884008,29240826